P-POD: Princeton Protein Orthology Database: GO3/Jaccard780

This family has 31 members: 4 Arabidopsis thaliana, 2 Caenorhabditis elegans, 2 Danio rerio, 1 Dictyostelium discoideum, 2 Drosophila melanogaster, 1 Escherichia coli, 2 Gallus gallus, 2 Homo sapiens, 3 Mus musculus, 6 Rattus norvegicus, 3 Saccharomyces cerevisiae, 3 Schizosaccharomyces pombe.

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GO3/Jaccard780
31 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_197339.1 · TAIR:locus:2146273 (F20L16_100 · F20L16.100 · AT5G18380)⌘
A. thalianaNCBI:NP_187073.1 · TAIR:locus:2103035 (T6K12_15 · T6K12.15 · AT3G04230)⌘
A. thalianaNCBI:NP_178826.1 · TAIR:locus:2052120 (AT2G09990 · F7B19_13 · F7B19.13)⌘
A. thalianaNCBI:NP_177635.1 · TAIR:locus:2037222 (AT1G74970 · TWN3 · F25A4.6 · RPS9 · F25A4_6)RIBOSOMAL PROTEIN S9⌘
C. elegansWB:WBGene00004485 (T01C3.6 · rps-16) · UniProtKB:Q22054⌘
C. elegansWB:WBGene00017319 (F09G8.3) · UniProtKB:P34388⌘
D. rerioUniProtKB:Q0P4B8 · ZFIN:ZDB-GENE-060825-257 (zgc:153172)⌘
D. rerioUniProtKB:Q1LWH1 · ZFIN:ZDB-GENE-050506-107 (rps16)ribosomal protein S16⌘
D. discoideumUniProtKB:Q54Q51 · dictyBase:DDB_G0284093 (rps16)40S ribosomal protein S16⌘
D. melanogasterUniProtKB:Q9W237 · FB:FBgn0034743 (RpS16 · CG4046 · bs32d05.y1)Ribosomal protein S16⌘
D. melanogasterUniProtKB:Q8SXF0 · FB:FBgn0037529 (MRP-S9 · mRpS9 · CG2957)mitochondrial ribosomal protein S9⌘
E. coliUniProtKB:P0A7X3 · ECOLI:EG10908-MONOMER (b3230 · ECK3219 · rpsI · RpsI)30S ribosomal subunit protein S9⌘
G. gallusNCBI:XP_416113 · ENTREZ:417871
G. gallusNCBI:XP_416921 · ENTREZ:418723
H. sapiensENSEMBL:ENSG00000105193 · UniProtKB:P62249 (RPS16 · IPI00221092 · P62249 · RS16_HUMAN)40S ribosomal protein S16⌘
H. sapiensENSEMBL:ENSG00000135972 · UniProtKB:P82933 (MRPS9 · RPMS9 · IPI00641924 · RT09_HUMAN · P82933)28S ribosomal protein S9, mitochondrial⌘
M. musculusNCBI:NP_001103687 · MGI:MGI:3704259 (ENSMUSG00000060419)predicted gene, ENSMUSG00000060419⌘
M. musculusUniProtKB:P14131 · MGI:MGI:98118 (Rps16)ribosomal protein S16⌘
M. musculusUniProtKB:Q9D7N3 · MGI:MGI:1916777 (Mrps9)mitochondrial ribosomal protein S9⌘
R. norvegicusNCBI:XP_233593 · RGD:1561484 (RGD1561484)similar to ribosomal protein S16⌘
R. norvegicusNCBI:XP_001077718 · RGD:1593309 (LOC691983)similar to 40S ribosomal protein S16⌘
R. norvegicusNCBI:XP_345347 · RGD:1561137 (RGD1561137)similar to 40S ribosomal protein S16⌘
R. norvegicusNCBI:XP_236683 · RGD:1559743 (RGD1559743)similar to 40S ribosomal protein S16⌘
R. norvegicusUniProtKB:P62250 · RGD:621031 (Rps16)ribosomal protein S16⌘
R. norvegicusUniProtKB:Q5I0K4 · RGD:1306558 (Mrps9)mitochondrial ribosomal protein S9⌘
S. cerevisiaeUniProtKB:P40213 · SGD:S000004751 (YMR143W · RPS16A)Protein component of the small (40S) ribosomal subunit⌘
S. cerevisiaeUniProtKB:P40213 · SGD:S000002241 (RPS16B · YDL083C)Protein component of the small (40S) ribosomal subunit⌘
S. cerevisiaeUniProtKB:P38120 · SGD:S000000350 (YBR146W · MRPS9)Mitochondrial ribosomal protein of the small subunit⌘
S. pombeUniProtKB:O60144 · GeneDB_Spombe:SPAC664.04c (rps16 · rps16-2 · SPAC664.04c · rps1602)40S ribosomal protein S16⌘
S. pombeUniProtKB:O60144 · GeneDB_Spombe:SPBC18H10.14 (rps1601 · SPBC18H10.14 · rps16-1)40S ribosomal protein S16⌘
S. pombeUniProtKB:O14006 · GeneDB_Spombe:SPAC29A4.03c (SPAC29A4.03c)mitochondrial ribosomal protein subunit S9⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu