P-POD: Princeton Protein Orthology Database: GO3/Jaccard681

This family has 34 members: 6 Arabidopsis thaliana, 3 Caenorhabditis elegans, 4 Danio rerio, 1 Dictyostelium discoideum, 2 Drosophila melanogaster, 3 Gallus gallus, 3 Homo sapiens, 3 Mus musculus, 5 Rattus norvegicus, 2 Saccharomyces cerevisiae, 2 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Jaccard681
34 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_566664.1 · TAIR:locus:2085750 (PDI12 · K10D20.10 · ATPDI12 · ATPDIL5-3 · AT3G20560)ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 12 · PROTEIN DISULFIDE ISOMERASE 12 · PDI-LIKE 5-3⌘
A. thalianaNCBI:NP_564467.2 · TAIR:locus:2034330 (F5J5_4 · F5J5.4 · AT1G36050)⌘
A. thalianaNCBI:NP_564162.1 · TAIR:locus:2015056 (F16L1.7 · AT1G22200 · F16L1_7)⌘
A. thalianaNCBI:NP_567765.2 · TAIR:locus:2136491 (AT4G27080 · T24A18.30 · PDI7 · ATPDI7 · ATPDIL5-4)PDI-LIKE 5-4 · ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 7 · PROTEIN DISULFIDE ISOMERASE 7⌘
A. thalianaNCBI:NP_188868.2 · TAIR:locus:2087817 (AT3G22280 · AT3G22290 · MCB17.1)⌘
A. thalianaNCBI:NP_175508.2 · TAIR:locus:2036371
C. elegansWB:WBGene00007668 · UniProtKB:Q93541
C. elegansWB:WBGene00010725 · UniProtKB:Q93878
C. elegansWB:WBGene00022416 · UniProtKB:Q95XJ9
D. rerioENSEMBL:ENSDARP00000023122
D. rerioZFIN:ZDB-GENE-050913-75 (zgc:114085) · UniProtKB:Q4V8Y6⌘
D. rerioUniProtKB:Q7T2D4 · ZFIN:ZDB-GENE-040426-1331 (ergic2)ERGIC and golgi 2⌘
D. rerioUniProtKB:Q803I2 · ZFIN:ZDB-GENE-040426-795 (ergic3)ERGIC and golgi 3⌘
D. discoideumUniProtKB:Q54UL9 · dictyBase:DDB_G0280993 (DDB_G0280993)DUF1692 family protein⌘
D. melanogasterFB:FBgn0024983 (154711_at · CG4293 · EG:65F1.1) · UniProtKB:O76896⌘
D. melanogasterFB:FBgn0036489 (CG7011) · UniProtKB:Q9VUM3⌘
G. gallusNCBI:XP_415941 · ENTREZ:417697
G. gallusNCBI:XP_414530 · ENTREZ:416205
G. gallusNCBI:XP_417322 · ENTREZ:419137
H. sapiensENSEMBL:ENSG00000113719 · UniProtKB:Q969X5 (ERGIC32 · IPI00003635 · ERGIC1 · Q969X5 · IPI00022887 · HT034 · ERGI1_HUMAN · KIAA1181 · IPI00021763)Endoplasmic reticulum-Golgi intermediate compartment protein 1⌘
H. sapiensENSEMBL:ENSG00000087502 · UniProtKB:Q96RQ1 (IPI00165651 · ERV41 · Q96RQ1 · ERGI2_HUMAN · CDA14 · ERGIC2 · PTX1)Endoplasmic reticulum-Golgi intermediate compartment protein 2⌘
H. sapiensENSEMBL:ENSG00000125991 · UniProtKB:Q9Y282 (ERGIC3 · IPI00006438 · ERGI3_HUMAN · IPI00552115 · PRO0989 · CGI-54 · Q9Y282 · SDBCAG84 · IPI00472099 · C20orf47 · ERV46)Endoplasmic reticulum-Golgi intermediate compartment protein 3⌘
M. musculusUniProtKB:Q9DC16 · MGI:MGI:1914708 (Ergic1)endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1⌘
M. musculusUniProtKB:Q9CR89 · MGI:MGI:1914706 (Ergic2)ERGIC and golgi 2⌘
M. musculusUniProtKB:Q9CQE7 · MGI:MGI:1913616 (NY-BR-84 · CGI-54 · D2Ucla1 · Sdbcag84 · Ergic3)ERGIC and golgi 3⌘
R. norvegicusNCBI:XP_001066818 · RGD:1585015 (Ergic1)endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1⌘
R. norvegicusNCBI:XP_001063333 · RGD:1594010
R. norvegicusNCBI:XP_578024 · RGD:1561309
R. norvegicusNCBI:XP_001066442 · RGD:1308144 (Ergic3)ERGIC and golgi 3⌘
R. norvegicusRGD:1310606 · UniProtKB:Q5XIS4
S. cerevisiaeUniProtKB:Q04651 · SGD:S000004532 (YML067C · ERV41)Protein localized to COPII-coated vesicles, forms a complex with Erv46p⌘
S. cerevisiaeUniProtKB:P39727 · SGD:S000000040 (YAL042W · FUN9 · ERV46)Protein localized to COPII-coated vesicles, forms a complex with Erv41p⌘
S. pombeUniProtKB:O94283 · GeneDB_Spombe:SPBC2G5.04c (SPBC2G5.04c)COPII-coated vesicle component Erv41 (predicted) · COPII-coated vesicle component Erv41⌘
S. pombeUniProtKB:Q09895 · GeneDB_Spombe:SPAC24B11.08c (SPAC24B11.08c)COPII-coated vesicle component Erv46⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu