P-POD: Princeton Protein Orthology Database: GO3/Jaccard3998

This family has 9 members: 1 Arabidopsis thaliana, 1 Dictyostelium discoideum, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 2 Saccharomyces cerevisiae, 2 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

9 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2040761 · NCBI:NP_181304.2
D. discoideumdictyBase:DDB_G0284149 (DDB_G0284149 · unknown) · UniProtKB:Q54Q63⌘
G. gallusNCBI:XP_414816 · ENTREZ:416512
H. sapiensENSEMBL:ENSG00000141034 · UniProtKB:Q8IVV7
M. musculusMGI:MGI:1914021 · UniProtKB:Q9CPY6
S. cerevisiaeUniProtKB:P38263 · SGD:S000000309 (YBR105C · VID24 · GID4)Peripheral membrane protein located at Vid (vacuole import and degradation) vesicles⌘
S. cerevisiaeUniProtKB:P53242 · SGD:S000003298 (YGR066C)Putative protein of unknown function⌘
S. pombeUniProtKB:Q10079 · GeneDB_Spombe:SPAC3H1.14 (SPAC3H1.14 · SPAC9G1.01)cytoplasmic vesicle protein, Vid24 family⌘
S. pombeUniProtKB:Q9UT04 · GeneDB_Spombe:SPAP8A3.13c (SPAP8A3.13c)Vid24 family protein⌘

No functional conservation results.

Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu