P-POD: Princeton Protein Orthology Database: GO3/Jaccard3528

This family has 10 members: 1 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

10 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2060010 · NCBI:NP_181742.2
C. elegansWB:WBGene00008722 (F12F6.7) · UniProtKB:Q19366⌘
D. rerioUniProtKB:Q90X40 · ZFIN:ZDB-GENE-030616-157 (pold2)polymerase (DNA directed), delta 2, regulatory subunit⌘
D. discoideumUniProtKB:Q54TN8 · dictyBase:DDB_G0281641 (polD2)DNA polymerase delta subunit 2, DNA polymerase subunit delta p50⌘
D. melanogasterFB:FBgn0027903 (BcDNA:HL03874 · CG12018) · UniProtKB:Q9W088⌘
H. sapiensENSEMBL:ENSG00000106628 · UniProtKB:P49005 (DPOD2_HUMAN · IPI00025616 · POLD2 · P49005)DNA polymerase delta subunit 2⌘
M. musculusUniProtKB:O35654 · MGI:MGI:1097163 (Pold2 · po1D2 · p50 · 50kDa)polymerase (DNA directed), delta 2, regulatory subunit⌘
R. norvegicusUniProtKB:Q6AXY4 · RGD:1304954 (Pold2)polymerase (DNA directed), delta 2, regulatory subunit⌘
S. cerevisiaeUniProtKB:P46957 · SGD:S000003766 (YJR006W · HYS2 · HUS2 · SDP5 · POL31)DNA polymerase III (delta) subunit, essential for cell viability⌘
S. pombeUniProtKB:P87324 · GeneDB_Spombe:SPAC27E2.05 (mis1 · cdc1 · SPAC27E2.05)DNA polymerase delta small subunit Cdc1⌘
ProteinPublicationCurator Notes
UniProtKB:P46957 · SGD:S000003766PMID:9677405 Gerik KJ, et al. Characterization of the two small subunits of Saccharomyces cerevisiae DNA polymerase delta. J Biol Chem. 1998 Jul 31;273(31):19747-55.The S. cerevisiae protein HYS2 was expressed in E. coli, but complementation was not directly tested. This paper describes co-expression of yeast Pol31p and Pol32p in E. coli.
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
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