P-POD: Princeton Protein Orthology Database: GO3/Jaccard350

This family has 56 members: 7 Arabidopsis thaliana, 6 Caenorhabditis elegans, 8 Danio rerio, 3 Dictyostelium discoideum, 4 Drosophila melanogaster, 5 Gallus gallus, 6 Homo sapiens, 5 Mus musculus, 6 Rattus norvegicus, 3 Saccharomyces cerevisiae, 3 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Jaccard350
56 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2051970 (SNF7.2 · F6F22.14 · VPS32 · AT2G19830 · F6F22_14) · NCBI:NP_179573.1⌘
A. thalianaNCBI:NP_001078328.1 · TAIR:locus:2097998 (T17J13.40 · AT3G62080)⌘
A. thalianaNCBI:NP_196488.1 · TAIR:locus:2184767 (VPS20.2 · VPS20 · AT5G09260 · T2K12.4)VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20.2⌘
A. thalianaNCBI:NP_194645.1 · TAIR:locus:2119956 (F19B15_190 · AT4G29160 · F19B15.190 · SNF7.1 · VPS32)⌘
A. thalianaNCBI:NP_568143.1 · TAIR:locus:2175483 (MUK11_17 · VPS60.2 · AT5G04850 · MUK11.17)⌘
A. thalianaNCBI:NP_568980.1 · TAIR:locus:2163996 (MGI19_8 · MGI19.8 · VPS20.1 · VPS20 · AT5G63880)⌘
A. thalianaNCBI:NP_187675.2 · TAIR:locus:2075800 (AT3G10640 · F13M14.7 · VPS60.1)⌘
C. elegansWB:WBGene00018290 (F41E6.9) · UniProtKB:O16458⌘
C. elegansWB:WBGene00016961 (vps-32.1 · C56C10.3) · UniProtKB:Q18886⌘
C. elegansWB:WBGene00020025 (R12C12.5) · UniProtKB:Q21959⌘
C. elegansWB:WBGene00011976 (T24B8.2) · UniProtKB:Q22718⌘
C. elegansWB:WBGene00016497 (vps-32.2 · C37C3.3) · UniProtKB:Q22916⌘
C. elegansWB:WBGene00022027 (Y65B4A.3 · vps-20) · UniProtKB:Q9BL60⌘
D. rerioENSEMBL:ENSDARP00000056730
D. rerioENSEMBL:ENSDARP00000080696
D. rerioZFIN:ZDB-GENE-040426-906 (zgc:56112) · UniProtKB:Q7ZVC4⌘
D. rerioUniProtKB:Q6IQ73 · ZFIN:ZDB-GENE-040426-2812 (chmp4b)chromatin modifying protein 4B⌘
D. rerioUniProtKB:Q7T339 · ZFIN:ZDB-GENE-040426-1374 (chmp5)chromatin modifying protein 5⌘
D. rerioUniProtKB:Q503V0 · ZFIN:ZDB-GENE-040924-2 (chmp6l)chromatin modifying protein 6, like⌘
D. rerioUniProtKB:Q6PBQ2 · ZFIN:ZDB-GENE-040426-1750 (chmp7)CHMP family, member 7⌘
D. rerioUniProtKB:Q568Q1 · ZFIN:ZDB-GENE-050417-389 (chmp4c)chromatin modifying protein 4C⌘
D. discoideumUniProtKB:Q86H98 · dictyBase:DDB_G0275573 (vps32 · Ddvps32)SNF7 family protein⌘
D. discoideumUniProtKB:Q54JK4 · dictyBase:DDB_G0287993 (vps60)SNF7 family protein⌘
D. discoideumUniProtKB:Q54KZ4 · dictyBase:DDB_G0287021 (vps20)SNF7 family protein⌘
D. melanogasterFB:FBgn0086656 (vps32 · Snf7/Vps32 · vps32/snf7 · shrub · CG8055 · Vps32 · ESCRT-III · anon-WO0118547.180 · shrb) · UniProtKB:Q8T0Q4⌘
D. melanogasterFB:FBgn0036740 (anon-74EFb · bs36h07.y1 · CG6259) · UniProtKB:Q9VVI9⌘
D. melanogasterFB:FBgn0034744 (vps20 · anon-EST:Posey40 · Vps20 · CG4071) · UniProtKB:Q9W236⌘
D. melanogasterUniProtKB:Q9Y124 · FB:FBgn0027565 (CG5498 · BcDNA:GH08385)transcript 2⌘
G. gallusNCBI:XP_419052 · ENTREZ:420968
G. gallusNCBI:XP_418312 · ENTREZ:420201
G. gallusENTREZ:419150 · UniProtKB:Q5ZHP5 (RCJMB04_34n7 · CHMP4B · CHM4B_CHICK · Q5ZHP5 · IPI00582041)Charged multivesicular body protein 4b⌘
G. gallusENTREZ:428673 · UniProtKB:Q5ZL55 (CHMP6_CHICK · RCJMB04_7k13 · Q5ZL55 · IPI00585289 · CHMP6)Charged multivesicular body protein 6⌘
G. gallusENTREZ:419535 · UniProtKB:Q5ZJB7 (IPI00582132 · RCJMB04_19g23 · CHMP7_CHICK · CHMP7 · Q5ZJB7)Charged multivesicular body protein 7⌘
H. sapiensENSEMBL:ENSG00000100931 · UniProtKB:Q9BY43 (CHM4A_HUMAN · C14orf123 · Q9BY43 · IPI00794397 · HSPC134 · CHMP4A · SHAX2 · CDA04)Charged multivesicular body protein 4a⌘
H. sapiensENSEMBL:ENSG00000101421 · UniProtKB:Q9H444 (CHMP4B · Q9H444 · IPI00025974 · C20orf178 · CHM4B_HUMAN · SHAX1)Charged multivesicular body protein 4b⌘
H. sapiensENSEMBL:ENSG00000164695 · UniProtKB:Q96CF2 (SHAX3 · CHMP4C · IPI00060414 · Q96CF2 · CHM4C_HUMAN)Charged multivesicular body protein 4c⌘
H. sapiensENSEMBL:ENSG00000086065 · UniProtKB:Q9NZZ3 (IPI00100796 · PNAS-2 · C9orf83 · PNAS-114 · HSPC177 · CHMP5_HUMAN · SNF7DC2 · Q9NZZ3 · CHMP5 · CGI-34)Charged multivesicular body protein 5⌘
H. sapiensENSEMBL:ENSG00000176108 · UniProtKB:Q96FZ7 (Q96FZ7 · CHMP6_HUMAN · IPI00305423 · VPS20 · CHMP6)Charged multivesicular body protein 6⌘
H. sapiensENSEMBL:ENSG00000147457 · UniProtKB:Q8WUX9 (CHMP7_HUMAN · IPI00395463 · CHMP7 · Q8WUX9)Charged multivesicular body protein 7⌘
M. musculusUniProtKB:Q9D8B3 · MGI:MGI:1922858 (Chmp4b)chromatin modifying protein 4B⌘
M. musculusUniProtKB:Q9D7F7 · MGI:MGI:1913621 (Chmp4c)chromatin modifying protein 4C⌘
M. musculusUniProtKB:Q9D7S9 · MGI:MGI:1924209 (Chmp5)chromatin modifying protein 5⌘
M. musculusUniProtKB:P0C0A3 · MGI:MGI:3583942 (Chmp6)chromatin modifying protein 6⌘
M. musculusUniProtKB:Q8R1T1 · MGI:MGI:1913922 (Chmp7)CHMP family, member 7⌘
R. norvegicusNCBI:XP_001081792 · RGD:1565325 (Chmp6)chromatin modifying protein 6⌘
R. norvegicusNCBI:XP_001073409 · RGD:1309846 (Chmp4b)chromatin modifying protein 4B⌘
R. norvegicusNCBI:XP_001069293 · RGD:1308779 (Chmp7)CHMP family, member 7⌘
R. norvegicusNCBI:XP_001054829 · RGD:1583604
R. norvegicusUniProtKB:Q569C1 · RGD:1564543 (Chmp4c)chromatin modifying protein 4C⌘
R. norvegicusUniProtKB:Q4QQV8 · RGD:1305968 (Chmp5)chromatin modifying protein 5⌘
S. cerevisiaeUniProtKB:P39929 · SGD:S000004015 (YLR025W · VPL5 · RNS4 · VPS32 · SNF7 · DID1)One of four subunits of the endosomal sorting complex required for transport III (ESCRT-III)⌘
S. cerevisiaeUniProtKB:Q04272 · SGD:S000004682 (VPT20 · VPL10 · YMR077C · VPS20 · CHM6)Myristoylated subunit of ESCRTIII, the endosomal sorting complex required for transport of transmembrane proteins into the multivesicular body pathway to the lysosomal/vacuolar lumen⌘
S. cerevisiaeUniProtKB:Q03390 · SGD:S000002894 (MOS10 · YDR486C · VPS60 · CHM5)Cytoplasmic and vacuolar membrane protein involved in late endosome to vacuole transport⌘
S. pombeUniProtKB:Q9P7F7 · GeneDB_Spombe:SPAC1142.07c (snf7 · vps32 · SPAC1142.07c)vacuolar sorting protein Vps32⌘
S. pombeUniProtKB:O74422 · GeneDB_Spombe:SPCC162.06c (SPCC162.06c)vacuolar sorting protein Vps60⌘
S. pombeUniProtKB:O94318 · GeneDB_Spombe:SPBC215.14c (vps20 · SPBC215.14c)vacuolar sorting protein Vps20⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
OMIM (1)
ENSEMBL:ENSG00000101421 · UniProtKB:Q9H444#605387 CATARACT, POSTERIOR POLAR, 3; CTPP3;;CPP3
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu