P-POD: Princeton Protein Orthology Database: GO3/Jaccard3089

This family has 11 members: 1 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Jaccard3089
11 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2034506 (AT1G31780 · F5M6.21 · F5M6_21) · NCBI:NP_174458.2⌘
C. elegansWB:WBGene00019481 (cogc-6) · UniProtKB:Q21270⌘
D. rerioENSEMBL:ENSDARP00000092843
D. discoideumUniProtKB:Q54CT0 · dictyBase:DDB_G0292784 (cog6)oligomeric Golgi complex component⌘
D. melanogasterUniProtKB:Q9V564 · FB:FBgn0033401
G. gallusNCBI:XP_417082 · ENTREZ:418888
H. sapiensENSEMBL:ENSG00000133103 · UniProtKB:Q9Y2V7 (COG6 · IPI00398963 · KIAA1134 · IPI00889669 · IPI00642611 · Q9Y2V7 · COG6_HUMAN)Conserved oligomeric Golgi complex subunit 6⌘
M. musculusUniProtKB:Q8R3I3 · MGI:MGI:1914792 (Cog6)component of oligomeric golgi complex 6⌘
R. norvegicusUniProtKB:Q68FP9 · RGD:1303283 (Cog6)component of oligomeric golgi complex 6⌘
S. cerevisiaeUniProtKB:P53959 · SGD:S000004986 (YNL041C · COG6 · SEC37 · COD2)Component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tethering complex that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments⌘
S. pombeUniProtKB:O94677 · GeneDB_Spombe:SPBC776.10c (SPBC776.10c · cog6)Golgi transport complex peripheral subunit Cog6 · Golgi transport complex peripheral subunit Cog6 (predicted)⌘

No functional conservation results.

DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu