P-POD: Princeton Protein Orthology Database: GO3/Jaccard2037

This family has 15 members: 1 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 5 Gallus gallus, 1 Homo sapiens, 1 Mus musculus, 1 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

15 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaTAIR:locus:2084299 · NCBI:NP_187305.1
C. elegansWB:WBGene00022739 (ZK430.1) · UniProtKB:Q23495⌘
D. rerioENSEMBL:ENSDARG00000071707 · UniProtKB:Q7SY48
D. discoideumUniProtKB:Q54ML4 · dictyBase:DDB_G0285875 (HEATR1 · UTP10 · DDB_G0285875)BP28, C-terminal domain-containing protein, U3 snoRNP protein, U3 small nucleolar ribonucleoprotein⌘
D. melanogasterUniProtKB:Q9VM75 · FB:FBgn0086451 (anon-WO0118547.160 · CG10805 · l(2)k09022)lethal (2) k09022⌘
G. gallusNCBI:XP_001234170 · ENTREZ:770848
G. gallusNCBI:XP_001236267 · ENTREZ:776764
G. gallusNCBI:XP_422958 · ENTREZ:425734
G. gallusNCBI:XP_001236931 · ENTREZ:777485
G. gallusNCBI:XP_426230 · ENTREZ:428672
H. sapiensENSEMBL:ENSG00000119285 · UniProtKB:Q9H583 (HEAT1_HUMAN · BAP28 · Q9H583 · HEATR1 · IPI00024279)HEAT repeat-containing protein 1⌘
M. musculusNCBI:NP_659084 · MGI:MGI:2442524
R. norvegicusNCBI:XP_341547 · RGD:1564769 (Heatr1)HEAT repeat containing 1⌘
S. cerevisiaeUniProtKB:P42945 · SGD:S000003645 (YJL109C · UTP10)Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA⌘
S. pombeUniProtKB:O60179 · GeneDB_Spombe:SPBC23E6.04c (SPBC23E6.04c · utp10)U3 snoRNP-associated protein Utp10⌘

No functional conservation results.

Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu