P-POD: Princeton Protein Orthology Database: GO3/Jaccard1523

This family has 19 members: 3 Arabidopsis thaliana, 1 Caenorhabditis elegans, 1 Danio rerio, 2 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Escherichia coli, 2 Gallus gallus, 2 Homo sapiens, 2 Mus musculus, 2 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Interactive Java Applets: Notung Tree Analysis · Jalview Alignment

GO3/Jaccard1523
19 members.
OrganismProtein (Synonyms)DescriptionAmiGO
A. thalianaNCBI:NP_190196.1 · TAIR:locus:2075306 (AT3G46100 · ATHRS1 · F12M12.70)HISTIDYL-TRNA SYNTHETASE 1 · HISTIDYL-TRNA SYNTHETASE⌘
A. thalianaNCBI:NP_001031826.1 · TAIR:locus:1009023403
A. thalianaNCBI:NP_186925.1 · TAIR:locus:2075472 (AT3G02760 · F13E7.30 · F13E7_30)⌘
C. elegansWB:WBGene00002001 (T11G6.1 · hrs-1) · UniProtKB:P34183⌘
D. rerioUniProtKB:Q66HY3 · ZFIN:ZDB-GENE-040912-152 (hars)histidyl-tRNA synthetase⌘
D. discoideumUniProtKB:Q86AS6 · dictyBase:DDB_G0274159 (HisRS · hisS)histidine-tRNA ligase, histidyl-tRNA synthetase⌘
D. discoideumUniProtKB:Q55D12 · dictyBase:DDB_G0269822 (HisRS · mhisS)histidine-tRNA ligase, histidyl-tRNA synthetase, putative mitochondrial histidyl-tRNA synthetase, putative mitochondrial histidine-tRNA ligase⌘
D. melanogasterUniProtKB:Q8IQX8 · FB:FBgn0027087 (HisRS · l(1)G0165 · HRS · CG6335 · l(1)G0358 · Aats-his)Histidyl-tRNA synthetase⌘
E. coliUniProtKB:P60906 · ECOLI:HISS-MONOMER (ECK2510 · HisS · hisS · b2514)histidyl-tRNA synthetase⌘
G. gallusNCBI:XP_001231932 · ENTREZ:768802
G. gallusENTREZ:416132 · UniProtKB:Q5ZK86 (Q5ZK86 · IPI00821125 · RCJMB04_12f15)⌘
H. sapiensENSEMBL:ENSG00000170445 · UniProtKB:P12081 (SYHC_HUMAN · HRS · P12081 · IPI00021808 · HARS)Histidyl-tRNA synthetase, cytoplasmic⌘
H. sapiensENSEMBL:ENSG00000112855 · UniProtKB:P49590 (IPI00027445 · HARS2 · P49590 · HO3 · HARSL · HARSR · SYHM_HUMAN)Probable histidyl-tRNA synthetase, mitochondrial⌘
M. musculusUniProtKB:Q61035 · MGI:MGI:108087 (MMHRS · Hars)histidyl-tRNA synthetase⌘
M. musculusUniProtKB:Q99KK9 · MGI:MGI:1918041 (Hars2 · HO3 · HARSR · Harsl)histidyl-tRNA synthetase 2, mitochondrial (putative)⌘
R. norvegicusUniProtKB:Q4QQV4 · RGD:1310695 (Hars)histidyl-tRNA synthetase⌘
R. norvegicusUniProtKB:Q5EB72 · RGD:1308426 (Hars2l)histidyl-tRNA synthetase 2-like⌘
S. cerevisiaeUniProtKB:P07263 · SGD:S000006237 (HTS1 · YPR033C · TSM4572)Cytoplasmic and mitochondrial histidine tRNA synthetase⌘
S. pombeUniProtKB:O43011 · GeneDB_Spombe:SPBC2G2.12 (hrs1 · SPBC2G2.12)mitochondrial and cytoplasmic histidine-tRNA ligase Hrs1⌘
ProteinPublicationCurator Notes
UniProtKB:P07263 · SGD:S000006237PMID:22930593 Vester A, et al. A loss-of-function variant in the human histidyl-tRNA synthetase (HARS) gene is neurotoxic in vivo. Hum Mutat. 2013 Jan;34(1):191-9.The H. sapiens protein HARS complements a homologous mutation in S. cerevisiae.
DescriptionSuffix
Sequences in this family.fasta
mafft aligned Fasta file.afasta
phyml newick file.newick
Notung rooted & rearranged newick file.newick.rooting.0.rearrange.0
Notung Homolog Table.newick.rooting.0.rearrange.0.homologs.csv
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu