This family has 23 members: 4 Arabidopsis thaliana, 3 Caenorhabditis elegans, 1 Danio rerio, 1 Dictyostelium discoideum, 2 Drosophila melanogaster, 1 Gallus gallus, 2 Homo sapiens, 1 Mus musculus, 4 Rattus norvegicus, 2 Saccharomyces cerevisiae, 2 Schizosaccharomyces pombe.
| Notung Tree [Applet] | Organism | Protein | AmiGO |
|---|---|---|---|
 D = Duplication Event | Arabidopsis thaliana | TAIR:gene:2100117 (AT3G10090.1) | AmiGO |
| Arabidopsis thaliana | TAIR:gene:2164385 (AT5G64140.1) | AmiGO | |
| Arabidopsis thaliana | TAIR:gene:3356433 | ||
| Arabidopsis thaliana | TAIR:gene:3440962 (AT5G03850.1) | AmiGO | |
| Caenorhabditis elegans | UniProtKB:Q95Y04 | ||
| Caenorhabditis elegans | WB:WBGene00004497 (rps-28) | AmiGO | |
| Caenorhabditis elegans | WP:WB:CE21842 | ||
| Danio rerio | ZFIN:ZDB-GENE-030131-2022 (rps28) | ||
| Dictyostelium discoideum | dictyBase:DDB0231067 (rps28) | AmiGO | |
| Drosophila melanogaster | FB:FBgn0030136 (RpS28b) | AmiGO | |
| Drosophila melanogaster | FB:FBgn0039739 (RpS28a) | AmiGO | |
| Gallus gallus | RefSeq:XP_001231865 (XP_001231865) | ||
| Homo sapiens | UniProtKB:A6NNT3 (A6NNT3_HUMAN) | ||
| Homo sapiens | UniProtKB:P62857 (RS28_HUMAN) | AmiGO | |
| Mus musculus | MGI:1859516 (Rps28) | AmiGO | |
| Rattus norvegicus | RGD:1582783 | ||
| Rattus norvegicus | RGD:1586760 | ||
| Rattus norvegicus | RGD:1587575 | ||
| Rattus norvegicus | RGD:621046 (Rps28) | AmiGO | |
| Saccharomyces cerevisiae | SGD:S000004254 (RPS28B) | AmiGO | |
| Saccharomyces cerevisiae | SGD:S000005693 (RPS28A) | AmiGO | |
| Schizosaccharomyces pombe | SPAC25G10.06 (rps2801) | AmiGO | |
| Schizosaccharomyces pombe | SPCC285.15c (rps2802) | AmiGO |
CLUSTAL W (1.83.1) multiple sequence alignment # P-POD
S.cerevisiae|SGD:S000005693 MDN--KTPVTLAK--VIKVLGRTGSRGGVTQVRVEFLED---TSRTIVRNVKGPVRENDI
S.cerevisiae|SGD:S000004254 MDS--KTPVTLAK--VIKVLGRTGSRGGVTQVRVEFLED---TSRTIVRNVKGPVRENDI
S.pombe|SPCC285.15c MDSS-KVPVKLAK--VIKVLGRTGSRGGVTQVRVEFMDD---TSRSIIRNVKGPVREDDI
S.pombe|SPAC25G10.06 MDSS-KVPVKLAK--VIKVLGRTGSRGGVTQVRVEFMDD---TSRSIIRNVKGPVREDDI
H.sapiens|UniProtKB:P62857 MDTSRVQPIKLAR--VTKVLGRTGSQGQCTQVRVEFMDD---TSRSIIRNVKGPVREGDV
G.gallus|RefSeq:XP_001231865 MDTSRVQPIKLARGGVTKVLGRTGSQGQCTQVRVEFMDD---TSRSIIRNVKGPVREGDV
M.musculus|MGI:1859516 MDTSRVQPIKLAR--VTKVLGRTGSQGQCTQVRVEFMDD---TSRSIIRNVKGPVREGDV
R.norvegicus|RGD:621046 MDTSRVQPIKLAR--VTKVLGRTGSQGQCTQVRVEFMDD---TSRSIIRNVKGPVREGDV
R.norvegicus|RGD:1586760 MDTSRVQPIKLAR--VTKVLGRTGSQGQCTQVRVEFMDD---TSRSIIRNVKGPVREGDV
R.norvegicus|RGD:1582783 MDTSRVQPIKLAR--VTKVLGRTGSQGQCTQVRVEFMDD---TSRSIIRNVKGPVREGDV
R.norvegicus|RGD:1587575 MDTSRVQPIKLAR--VTKVLGRTGSQGQCTQVRVEFMDD---TSRSIIRNVKGPVRESDV
H.sapiens|UniProtKB:A6NNT3 LDTSRVQPIKLAR--VTKVLGRTGSQGQCTQVRVEFMDD---TSRSIIRNVKGPVREGDV
D.rerio|ZFIN:ZDB-GENE-030131-2022 MDASRVQPIKLAR--VTKVLGRTGSQGQCTQVRVEFMDD---SNRSIIRNVKGPVREGDV
C.elegans|WP:WB:CE21842 MDK-----LTLAR--VTKVIGRTGSQGQCTQVRVEFINDQ--NNRSIIRNVKGPVREGDI
C.elegans|WB:WBGene00004497 MDK-----LTLAR--VTKVIGRTGSQGQCTQVRVEFINDQ--NNRSIIRNVKGPVREGDI
C.elegans|UniProtKB:Q95Y04 MDK-----LTLAR--VTKVIGRTGSQGQCTQVRVEFINDQ--NNRSIIRNVKGPVREGDI
A.thaliana|TAIR:gene:2100117 MDS----QIKHAV--VVKVMGRTGSRGQVTQVRVKFTDS----DRYIMRNVKGPVREGDI
A.thaliana|TAIR:gene:3440962 MDS----QIKHAV--VVKVMGRTGSRGQVTQVRVKFTDS----DRYIMRNVKGPVREGDI
A.thaliana|TAIR:gene:2164385 MDS----QIKHAV--VVKVMGRTGSRGQVTQVRVKFTDS----DRFIMRNVKGPVREGDV
A.thaliana|TAIR:gene:3356433 MDS----QIKHAV--VVKVMGRTGSRGQVTQVRVKFTDS----DRFIMRNVKGPVREGDV
D.melanogaster|FB:FBgn0030136 MDK----PVVWAR--VMKVLGRTGSQGQCTQVKVEFLGE---QNRQIIRNVKGPVREGDI
D.melanogaster|FB:FBgn0039739 MDK-----PQYAR--VVEILGRTGSQGQCTQVRVEFLGD---QSRQIIRNVKGPVRVGDI
D.discoideum|dictyBase:DDB0231067 MNTAATETVQLAK--VTEVLCRTGSRGAVTQVRVEFLGTAQGKERTLLRNVKGPVRKDDI
:: * * ::: ****:* ***:*:* .* ::******** .*:
S.cerevisiae|SGD:S000005693 LVLMESEREARRLR
S.cerevisiae|SGD:S000004254 LVLMESEREARRLR
S.pombe|SPCC285.15c LVLLESEREARRLR
S.pombe|SPAC25G10.06 LVLLESEREARRLR
H.sapiens|UniProtKB:P62857 LTLLESEREARRLR
G.gallus|RefSeq:XP_001231865 LTLLESEREARRLR
M.musculus|MGI:1859516 LTLLESEREARRLR
R.norvegicus|RGD:621046 LTLLESEREARRLR
R.norvegicus|RGD:1586760 LTLLESEREARRLR
R.norvegicus|RGD:1582783 LTLLESEREARRLR
R.norvegicus|RGD:1587575 LTLLESEREARRLR
H.sapiens|UniProtKB:A6NNT3 LTLLESEREARRLR
D.rerio|ZFIN:ZDB-GENE-030131-2022 LTLLESEREARRLR
C.elegans|WP:WB:CE21842 LTLLESEREARRLR
C.elegans|WB:WBGene00004497 LTLLESEREARRLR
C.elegans|UniProtKB:Q95Y04 LTLLESEREARRLR
A.thaliana|TAIR:gene:2100117 LTLLESEREARRLR
A.thaliana|TAIR:gene:3440962 LTLLESEREARRLR
A.thaliana|TAIR:gene:2164385 LTLLESEREARRLR
A.thaliana|TAIR:gene:3356433 LTLLESEREARRLR
D.melanogaster|FB:FBgn0030136 LTLLESEREARRLR
D.melanogaster|FB:FBgn0039739 LSLLETEREARRLR
D.discoideum|dictyBase:DDB0231067 LCLLETEREARRLR
* *:*:********
| Program | Link |
|---|---|
| ClustalW alignment file | .alnp |
| ClustalW dendrogram file | .dnd |
| Notung tree file: rearranged | .jtt.rooting.0.rearrange.0 |
| Phylip amino acid sequence Maximum Likelihood method | .jtt |
| Sequences in this family (FASTA) | ORTHOMCL978.fa |