Princeton Protein Orthology Database: GO0/ORTHOMCL1006

This family has 23 members: 5 Arabidopsis thaliana, 3 Caenorhabditis elegans, 2 Danio rerio, 1 Dictyostelium discoideum, 1 Drosophila melanogaster, 1 Escherichia coli, 1 Gallus gallus, 3 Homo sapiens, 1 Mus musculus, 3 Rattus norvegicus, 1 Saccharomyces cerevisiae, 1 Schizosaccharomyces pombe.

Notung Tree [Applet]OrganismProteinAmiGO

D = Duplication Event
Arabidopsis thalianaTAIR:gene:2047071 (AT2G21170.1) AmiGO
Arabidopsis thalianaTAIR:gene:2099905 (TPI) AmiGO
Arabidopsis thalianaTAIR:gene:3354057
Arabidopsis thalianaTAIR:gene:3354984
Arabidopsis thalianaTAIR:gene:4010712259 (AT5G36659.1)
Caenorhabditis elegansUniProtKB:Q10657
Caenorhabditis elegansWB:WBGene00006601 (tpi-1) AmiGO
Caenorhabditis elegansWP:WB:CE19040
Danio rerioZFIN:ZDB-GENE-020416-3 (tpi1a)
Danio rerioZFIN:ZDB-GENE-020416-4 (tpi1b)
Dictyostelium discoideumdictyBase:DDB0231425 (tpiA) AmiGO
Drosophila melanogasterFB:FBgn0086355 (Tpi) AmiGO
Escherichia coliP0A858 AmiGO
Gallus gallusUniProtKB:P00940 (TPIS_CHICK)
Homo sapiensRefSeq:XP_001134259 (XP_001134259)
Homo sapiensUniProtKB:P60174 (TPIS_HUMAN) AmiGO
Homo sapiensUniProtKB:Q2QD09 (Q2QD09_HUMAN)
Mus musculusMGI:98797 (Tpi1) AmiGO
Rattus norvegicusRGD:1560534 (LOC500959)
Rattus norvegicusRGD:1563601
Rattus norvegicusRGD:3896 (Tpi1) AmiGO
Saccharomyces cerevisiaeSGD:S000002457 (TPI1) AmiGO
Schizosaccharomyces pombeSPCC24B10.21 (tpi1) AmiGO
ProteinPublicationCurator Notes
SGD:S000002457[PubMed]3521890: McKnight GL, et al. Nucleotide sequence of the triosephosphate isomerase gene from Aspergillus nidulans: implications for a differential loss of introns. Cell. 1986 Jul 4;46(1):143-7.The A. nidulans protein tpiA complements the orthologous mutation in S. cerevisiae.
CLUSTAL W (1.83.1) multiple sequence alignment # P-POD


S.cerevisiae|SGD:S000002457       ----------------------------MARTFFVGGN----------------------
S.pombe|SPCC24B10.21              ----------------------------MARKFFVGGN----------------------
R.norvegicus|RGD:1563601          --------------------------MAPSRKFFVGGN----------------------
R.norvegicus|RGD:1560534          --------------------------MAPSRKFFVGGN----------------------
R.norvegicus|RGD:3896             --------------------------MAPSRKFFVGGN----------------------
M.musculus|MGI:98797              --------------------------MAPTRKFFVGGN----------------------
H.sapiens|UniProtKB:Q2QD09        --------------------------MAPSRKFFVGGN----------------------
H.sapiens|RefSeq:XP_001134259     --------------------------MAPSRKFFVVGN----------------------
H.sapiens|UniProtKB:P60174        --------------------------MAPSRKFFVGGN----------------------
G.gallus|UniProtKB:P00940         --------------------------MAP-RKFFVGGN----------------------
D.rerio|ZFIN:ZDB-GENE-020416-4    ---------------------------MSGRKFFVGGN----------------------
D.rerio|ZFIN:ZDB-GENE-020416-3    ---------------------------MSSRKFFVGGN----------------------
D.melanogaster|FB:FBgn0086355     ----------------------------MSRKFCVGGN----------------------
C.elegans|WP:WB:CE19040           ----------------------------MTRKFFVGGN----------------------
C.elegans|WB:WBGene00006601       ----------------------------MTRKFFVGGN----------------------
C.elegans|UniProtKB:Q10657        ----------------------------MTRKFFVGGN----------------------
A.thaliana|TAIR:gene:2047071      MAATSLTAPPSFSGLRRISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRGVVAM
A.thaliana|TAIR:gene:4010712259   MAATSLTAPPSFSGLRRISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRGVVAM
A.thaliana|TAIR:gene:3354057      MAATSLTAPPSFSGLRRISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRGVVAM
A.thaliana|TAIR:gene:2099905      ----------------------------MARKFFVGGN----------------------
A.thaliana|TAIR:gene:3354984      ----------------------------MARKFFVGGN----------------------
D.discoideum|dictyBase:DDB0231425 --------------------------MTGTRTFFVGGN----------------------
E.coli|P0A858                     -----------------------------MRHPLVMGN----------------------
                                                                :      *                      

S.cerevisiae|SGD:S000002457       -----------FKLNGSKQSIKEIVERLNTASIPEN--VEVVICPPATYLDYSVSLVKKP
S.pombe|SPCC24B10.21              -----------FKMNGSLESMKTIIEGLNTTKLNVGD-VETVIFPQNMYLITTRQQVKK-
R.norvegicus|RGD:1563601          -----------WKMNGRKKCLGELICTLNAAKMPAD--TEVVCAPPTAYIDFARQKLDP-
R.norvegicus|RGD:1560534          -----------WKMNGKKKCLGELICTLNAAKMPAD--TEVVCAPPTAYIDFARQKLDP-
R.norvegicus|RGD:3896             -----------WKMNGRKKCLGELICTLNAAKLPAD--TEVVCAPPTAYIDFARQKLDP-
M.musculus|MGI:98797              -----------WKMNGRKKCLGELICTLNAANVPAG--TEVVCAPPTAYIDFARQKLDP-
H.sapiens|UniProtKB:Q2QD09        -----------WKMNGRKQSLRELVRTLNAAKVPAD--TEVVCTPPTAYIDFARQKLDP-
H.sapiens|RefSeq:XP_001134259     -----------WKMNGRKQSLRELVRTLNAAKVPAD--TEVVCTPPTAYIDFARQKLDP-
H.sapiens|UniProtKB:P60174        -----------WKMNGRKQSLGELIGTLNAAKVPAD--TEVVCAPPTAYIDFARQKLDP-
G.gallus|UniProtKB:P00940         -----------WKMNGDKKSLGELIHTLNGAKLSAD--TEVVCGAPSIYLDFARQKLDA-
D.rerio|ZFIN:ZDB-GENE-020416-4    -----------WKMNGDKKSIEELANTLNSAKLNPD--TEVVCGAPTIYLDYARSKLDP-
D.rerio|ZFIN:ZDB-GENE-020416-3    -----------WKMNGDKESLGELIMTLNTASLNDK--TDVVCGAPSIYLDYARSKLDQ-
D.melanogaster|FB:FBgn0086355     -----------WKMNGDQKSIAEIAKTLSSAALDPN--TEVVIGCPAIYLMYARNLLPC-
C.elegans|WP:WB:CE19040           -----------WKMNGDYASVDGIVTFLNASADNSS--VDVVVAPPAPYLAYAKSKLKA-
C.elegans|WB:WBGene00006601       -----------WKMNGDYASVDGIVTFLNASADNSS--VDVVVAPPAPYLAYAKSKLKA-
C.elegans|UniProtKB:Q10657        -----------WKMNGDYASVDGIVTFLNASADNSS--VDVVVAPPAPYLAYAKSKLKA-
A.thaliana|TAIR:gene:2047071      AGSGKFFVGGNWKCNGTKDSIAKLISDLNSATLEAD--VDVVVSPPFVYIDQVKSSLTD-
A.thaliana|TAIR:gene:4010712259   AGSGK---------NGTKDSIAKLISDLNSATLEAD--VDVVVSPPFVYIDQVKSSLTD-
A.thaliana|TAIR:gene:3354057      AGSGKFFVGGNWKCNGTKDSIAKLISDLNSATLEAD--VDVVVSPPFVYIDQVKSSLTD-
A.thaliana|TAIR:gene:2099905      -----------WKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRS-
A.thaliana|TAIR:gene:3354984      -----------WKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRS-
D.discoideum|dictyBase:DDB0231425 -----------HKMNGSKSMLESLSKGMNESVENKEN-VDIFIAPSYPYLEFLSNKLDNK
E.coli|P0A858                     -----------WKLNGSRHMVHELVSNLRKELAGVAG-CAVAIAPPEMYIDMAKREAEGS
                                                **    :  :   :                    ::          

S.cerevisiae|SGD:S000002457       QVTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFAL
S.pombe|SPCC24B10.21              DIGVGAQNVFDKKNGAYTGENSAQSLIDAGITYTLTGHSERRTIFKESDEFVADKTKFAL
R.norvegicus|RGD:1563601          KIAVAAQNCYKVTNGAFTGEISPGMIKDLGATWVVLGHSERRHIFGESDELIGQKVNHAL
R.norvegicus|RGD:1560534          KIAVAAQNCYKVTNGAFTGEISPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVNHAL
R.norvegicus|RGD:3896             KIAVAAQNCYKVTNGAFTGEISPGMIKDLGATWVVLGHSERRHIFGESDELIGQKVNHAL
M.musculus|MGI:98797              KIAVAAQNCYKVTNGAFTGEISPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVSHAL
H.sapiens|UniProtKB:Q2QD09        KIAVAAQNCYKVTNGAFTGEISPGMIKDCRATWVVLGHSERRHVFGESDELIGQKVAHAL
H.sapiens|RefSeq:XP_001134259     KIAVAAQNCYKVTNGAFTGEISPGMIKDCRATWVVLGHSERRHVFGESDELIGQKVAHAL
H.sapiens|UniProtKB:P60174        KIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHAL
G.gallus|UniProtKB:P00940         KIGVAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHAL
D.rerio|ZFIN:ZDB-GENE-020416-4    NIDVAAQNCYKVAKGAFTGEISPAMIKDCGVKWVILGHSERRHVFGESDELIGQKVAHAL
D.rerio|ZFIN:ZDB-GENE-020416-3    RIGVAAQNCYKVPKGAFTGEISPAMIKDCGIDWVILGHSERRHVFGESDELIGQKVAHCL
D.melanogaster|FB:FBgn0086355     ELGLAGQNAYKVAKGAFTGEISPAMLKDIGADWVILGHSERRAIFGESDALIAEKAEHAL
C.elegans|WP:WB:CE19040           GVLVAAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHAL
C.elegans|WB:WBGene00006601       GVLVAAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHAL
C.elegans|UniProtKB:Q10657        GVLVAAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHAL
A.thaliana|TAIR:gene:2047071      RIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYAL
A.thaliana|TAIR:gene:4010712259   RIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYAL
A.thaliana|TAIR:gene:3354057      RIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYAL
A.thaliana|TAIR:gene:2099905      DFFVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYAL
A.thaliana|TAIR:gene:3354984      DFFVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYAL
D.discoideum|dictyBase:DDB0231425 KFKVCSQNCYSVAKGAFTGEISANMLVDLGIPYVIIGHSERRNVFSESSELITKKTKYAI
E.coli|P0A858                     HIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLK
                                   . : .**      **:*** *   : :    : : ******    *.. :: .*     

S.cerevisiae|SGD:S000002457       GQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEV--KDWTNVVVAYEPVWAIGTGLA
S.pombe|SPCC24B10.21              EQGLTVVACIGETLAEREANETINVVVRQLNAIADKV--QNWSKIVIAYEPVWAIGTGKT
R.norvegicus|RGD:1563601          SEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNV--KDWSKVVLAYEPVWAIGTGKT
R.norvegicus|RGD:1560534          SEGLGVIACIGEKLDEREAGITDKVVFEQTKAIADNV--KDWSKVVLAYEPVWAIGTGKT
R.norvegicus|RGD:3896             SEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNV--KDWCKVVLAYEPVWAIGTGKT
M.musculus|MGI:98797              AEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNV--KDWSKVVLAYEPVWAIGTGKT
H.sapiens|UniProtKB:Q2QD09        AEGLGVIACTGEKLDEREAGITEKVVFEQTKVIADNV--KDWSKVVLAYEPVWAIGTGKT
H.sapiens|RefSeq:XP_001134259     AEALGVIACTGEKLDEREAGITEKVVFEQTKVIADNV--KDWSKVVLAYEPVWAIGTGKT
H.sapiens|UniProtKB:P60174        AEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNV--KDWSKVVLAYEPVWAIGTGKT
G.gallus|UniProtKB:P00940         AEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNV--KDWSKVVLAYEPVWAIGTGKT
D.rerio|ZFIN:ZDB-GENE-020416-4    ENGLGVIACIGEKLDEREAGITEKVVFAQTKFIADNV--KDWSKVVLAYEPVWAIGTGKT
D.rerio|ZFIN:ZDB-GENE-020416-3    ESDLGVIACIGEKLEEREAGTTEDVVFEQTKVIADNV--KDWTRVVLAYEPVWAIGTGKT
D.melanogaster|FB:FBgn0086355     AEGLKVIACIGETLEEREAGKTNEVVARQMCAYAQKI--KDWKNVVVAYEPVWAIGTGQT
C.elegans|WP:WB:CE19040           EAGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKG--VSWENIVIAYEPVWAIGTGKT
C.elegans|WB:WBGene00006601       EAGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKG--VSWENIVIAYEPVWAIGTGKT
C.elegans|UniProtKB:Q10657        EAGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKG--VSWENIVIAYEPVWAIGTGKT
A.thaliana|TAIR:gene:2047071      SEGLGVIACIGEKLEEREAGKTFDVCFAQLKAFADAV--PSWDNIVVAYEPVWAIGTGKV
A.thaliana|TAIR:gene:4010712259   SEGLGVIACIGEKLEEREAGKTFDVCFAQLKAFADAV--PSWDNIVVAYEPVWAIGTGKV
A.thaliana|TAIR:gene:3354057      SEGLGVIACIGEKLEEREAGKTFDVCFAQLKAFADAV--PSWDNIVVAYEPVWAIGTGKV
A.thaliana|TAIR:gene:2099905      AQGLKVIACVGETLEEREAGSTMDVVAAQTKAIADRV--TNWSNVVIAYEPVWAIGTGKV
A.thaliana|TAIR:gene:3354984      AQGLKVIACVGETLEEREAGSTMDVVAAQTKAIADRV--TNWSNVVIAYEPVWAIGTGKV
D.discoideum|dictyBase:DDB0231425 SLGLTVILCLGELLADRKSNNTEHILSEQLKDFASFTP-EEWSKIVIAYEPVWAIGTGAV
E.coli|P0A858                     EQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKS
                                     :  : * **   :.::. * .:   *     .      :   *:***********  

S.cerevisiae|SGD:S000002457       ATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGAS
S.pombe|SPCC24B10.21              ATPEQAQEVHAEIRKWATNKLGASVAEGLRVIYGGSVNGGNCKEFLKFHDIDGFLVGGAS
R.norvegicus|RGD:1563601          ATPQQAQEVHEKLRGWLKCNVSEEVAQCTRIIYGGSVTGATCKELASQPDVDGFLVGGAS
R.norvegicus|RGD:1560534          ATPQQAQEVHEKLRGWLKCNVSEEVAQCTRIIYGGSVTGATCKELASQPDVDGFLVGGAS
R.norvegicus|RGD:3896             ATPQQAQEVHEKLRGWLKCNVSEGVAQCTRIIYGGSVTGATCKELASQPDVDGFLVGGAS
M.musculus|MGI:98797              ATPQQAQEVHEKLRGWLKSNVNDGVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGAS
H.sapiens|UniProtKB:Q2QD09        ATPQQDQEVHDKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPGVDGFLVGGAS
H.sapiens|RefSeq:XP_001134259     ATPQQDQEVHDKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPGVDGFLVGGAS
H.sapiens|UniProtKB:P60174        ATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGAS
G.gallus|UniProtKB:P00940         ATPQQAQEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGAS
D.rerio|ZFIN:ZDB-GENE-020416-4    ASPQQAQEVHDKLRQWLKTNVSEAVANSVRIIYGGSVTGGTCKELASQKDLDGFLVGGAS
D.rerio|ZFIN:ZDB-GENE-020416-3    ASPEQAQEVHEKLREWLRANVSDAVADSVRIIYGGSVTGGNCKELAAQADVDGFLVGGAS
D.melanogaster|FB:FBgn0086355     ATPDQAQEVHAFLRQWLSDNISKEVSASLRIQYGGSVTAANAKELAKKPDIDGFLVGGAS
C.elegans|WP:WB:CE19040           ASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGAS
C.elegans|WB:WBGene00006601       ASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGAS
C.elegans|UniProtKB:Q10657        ASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGAS
A.thaliana|TAIR:gene:2047071      ASPQQAQEVHVAVRGWLKKNVSEEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGAS
A.thaliana|TAIR:gene:4010712259   ASPQQAQEVHVAVRGWLKKNVSEEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGAS
A.thaliana|TAIR:gene:3354057      ASPQQAQEVHVAVRGWLKKNVSEEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGAS
A.thaliana|TAIR:gene:2099905      ASPAQAQEVHDELRKWLAKNVSADVAATTRIIYGGSVNGGNCKELGGQADVDGFLVGGAS
A.thaliana|TAIR:gene:3354984      ASPAQAQEVHDELRKWLAKNVSADVAATTRIIYGGSVNGGNCKELGGQADVDGFLVGGAS
D.discoideum|dictyBase:DDB0231425 ATPQEAQDTHVFIRKWISEKVSEDVAKKTSIMYGGSVNADNCHNLSKQSDIDGFLVGGAS
E.coli|P0A858                     ATPAQAQAVHKFIRDHIAK-VDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGAS
                                  *:  : *  *  :*      :.   :    : ****... ..  :    .:** ******

S.cerevisiae|SGD:S000002457       LK-PEFVDIINSRN------
S.pombe|SPCC24B10.21              LK-PEFHNIVNVHSL-----
R.norvegicus|RGD:1563601          LK-PEFLDIINAKQ------
R.norvegicus|RGD:1560534          LK-PEFVDIINAKQ------
R.norvegicus|RGD:3896             LK-PEFVDIINAKQ------
M.musculus|MGI:98797              LK-PEFVDIINAKQ------
H.sapiens|UniProtKB:Q2QD09        LK-PEFVDIINAKQ------
H.sapiens|RefSeq:XP_001134259     LK-PEFVDIINAKQ------
H.sapiens|UniProtKB:P60174        LK-PEFVDIINAKQ------
G.gallus|UniProtKB:P00940         LK-PEFVDIINAKH------
D.rerio|ZFIN:ZDB-GENE-020416-4    LK-PEFIDIINAKA------
D.rerio|ZFIN:ZDB-GENE-020416-3    LK-PEFVDIINARS------
D.melanogaster|FB:FBgn0086355     LK-PEFVDIINARQ------
C.elegans|WP:WB:CE19040           LK-PDFVKIINARS------
C.elegans|WB:WBGene00006601       LK-PDFVKIINARS------
C.elegans|UniProtKB:Q10657        LK-PDFVKIINARS------
A.thaliana|TAIR:gene:2047071      LKGPEFATIVNSVTSKKVAA
A.thaliana|TAIR:gene:4010712259   LKGPEFATIVNSVTSKKVAA
A.thaliana|TAIR:gene:3354057      LKGPEFATIVNSVTSKKVAA
A.thaliana|TAIR:gene:2099905      LK-PEFIDIIKAAEVKKSA-
A.thaliana|TAIR:gene:3354984      LK-PEFIDIIKAAEVKKSA-
D.discoideum|dictyBase:DDB0231425 LVASDFIAIIKSAVPKKY--
E.coli|P0A858                     LKADAFAVIVKAAEAAKQA-
                                  *    *  *::         
ProgramLink
ClustalW alignment file.alnp
ClustalW dendrogram file.dnd
Notung tree file: rearranged.jtt.rooting.0.rearrange.0
Phylip amino acid sequence Maximum Likelihood method.jtt
Sequences in this family (FASTA)ORTHOMCL1006.fa
ProteinDisease-related papers from SGD
SGD:S000002457[PubMed]12023819: Olah J, et al. (2002) Triosephosphate isomerase deficiency: a neurodegenerative misfolding disease. Biochem Soc Trans 30(2):30-8
Send questions, suggestions, and comments to: yfgdb@genomics.princeton.edu